FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086190

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086190
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16582193
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTCTA45100.014.1225961
ATCCGAC88800.07.4580727
TATCCGA105500.06.8916096
ACTCTAT94550.06.70195062
CTATCCG110700.06.4378275
TCTATCC114800.05.77063274
Produced by FastQC (version 0.11.5)