FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18119339
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA138950.016.4759529
AGAGCAC149100.015.5959438
GATCGGA166550.015.1252741
TCGGAAG181800.013.2307853
CAAGACA71900.012.98761751
ATCGGAA200800.012.6249582
AAGAGCA210900.011.5719117
TAGCAAC31500.011.431692
AGACATT83950.010.5515783
AAGACAT104350.09.52442
GGAAGAG295400.08.5542075
GTAGCAA45900.08.2008581
GAAGAGC319550.07.90770156
CATTCCA128250.07.57806546
CGGAAGA350150.07.21914864
ACATTCC138050.07.1444255
CACACGT79000.06.41538510-14
GACATTC154700.06.1449254
ATTCCAG165850.06.0770747
CACGTCT93400.05.719185410-14
Produced by FastQC (version 0.11.5)