FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16032204
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCACTC70150.09.4430287
AGTGAGT30950.08.8598421
GTGAGTA33750.07.68215042
ATGCACT89650.07.38888936
CACTCCC96250.06.58291349
TAGATTC58300.06.29858885
GCACTCC110450.05.8019698
TAACCCC49950.05.621679
Produced by FastQC (version 0.11.5)