FastQCFastQC Report
Sat 11 May 2024
EGAF00005086238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15899917
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCATGTATAAGAGAGATTAGTCACCGTTATTGAAGCTGGGATATGGCT317880.19992557193852017No Hit
TTACTAAGAGAACCATTTACACCACTAGCTATTACATGAATTAGCACACA190740.11996289037232082No Hit
TACTAAGAGAACCATTTACACCACTAGCTATTACATGAATTAGCACACAA177120.11139680792044387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)