FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17593700
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTCTA40650.035.6660041
ACTCTAT77200.019.0293082
TCTATCC126550.011.9498144
ATCCGAC133800.010.70667
CTCTATC143950.010.6054263
CTATCCG155800.09.8878285
TATCCGA163400.09.4719856
TCCGACA194100.07.89966448
CCGACAA277400.05.7091429
Produced by FastQC (version 0.11.5)