FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11696916
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA155550.010.8647711
AGAGCGT163450.010.0836828
TCGGAAG183950.09.1555933
GAGCGTC190800.08.8647299
AAGAGCG201350.08.5081427
ATCGGAA202150.08.4769012
GAAGAGC235100.07.50109626
GGAAGAG244350.07.1286435
TAGATCT49000.07.078468340-44
TACGTGT55150.06.602146630-34
CGGAAGA278000.06.2394244
ACGTGTA58250.06.053698535-39
CGTACGT64900.05.67682430-34
Produced by FastQC (version 0.11.5)