FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16725988
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGGCC10557.68523E-910.9169825
GGGCTAG11803.945388E-910.3741512
GGCTAGG19852.3199063E-66.5275033
GCTAGGC17401.1038343E-46.20550444
GAGCACA204600.05.98106349
GATCGGA203250.05.86950061
AGAGCAC217900.05.4177848
CTAGATC14550.05.3435693140-144
TTAGATC20750.05.204078140-144
TCGGAAG250250.05.0913653
Produced by FastQC (version 0.11.5)