FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16725988
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGGCC9954.4211447E-710.1280475
GGGCTAG13954.149833E-57.22902732
GCTAGGC16455.0868104E-56.56366164
CTAGTCG31700.06.176425530-34
ACTAGTC34300.05.792186330-34
ATACTAG40150.05.450177725-29
CTAGATC12700.05.441364140-144
TACTAGT36400.05.378858625-29
GATCGGA207200.05.19651651
Produced by FastQC (version 0.11.5)