FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086513

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086513
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16619658
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGAAGCT193550.015.616124
GGGAAGC203850.015.1886023
TCGGGAA231400.013.1001881
GCTAGTC13250.012.708958120-124
AGCTGAA241650.011.7931717
CGGGAAG254100.011.731562
GGCTAGT14300.011.675136120-124
AAGCTGA266550.011.39333256
GAGCTAG15650.010.127501595-99
GCTGAAG280550.09.6449468
AGGCTAG18100.08.905932120-124
CTAGTCC12600.08.681264120-124
GAAGCTG364850.08.5998155
AGCTAGA20850.08.36884195-99
TAACTTG48100.07.33116879
CTGAAGC201200.07.2608979
GCTAGAA24950.06.99360195-99
GATCTTA68150.05.38844061
CGTAACT62450.05.07040269
Produced by FastQC (version 0.11.5)