FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086536

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086536
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14725834
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGTGT56750.040.0913779
ATCCGAC85300.027.7773111
GGTAGTG93000.025.0837128
CGGTAGT103300.022.4432287
ACGGTAG109100.021.3160886
TCCGACG125950.019.150922
GACGGTA139450.016.9349965
CGACGGT166750.014.378324
GGACTAG13950.012.79991915-19
ACTAGCC15350.011.72633420-24
GACTAGC16950.010.53446920-24
CTAGCTC17500.010.20342745-49
CCGACGG251600.09.8155853
TCTAGCT20700.08.90434645-49
CAAGTTG116350.08.2302887
AGTTGAT133750.07.53640139
CTAGCCT27400.06.569314520-24
CACTCTA42000.06.51594831
TTCTAGC28400.06.439435545-49
TTCAAGT154300.06.3927015
Produced by FastQC (version 0.11.5)