FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14979209
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTACT45600.012.4710776
CTCCCTA48350.011.4643394
CTTAGTC34000.011.43481358
TTAGTCC37300.010.8091969
TCCCTAC60000.09.8380095
CCTTAGT44150.09.6197337
CCTACTT78300.07.63058957
TCCTTAG62350.07.1580876
GCTCCCT92900.06.200123
TGCTCCC114800.05.4572182
CTACCTC96800.05.0511191
Produced by FastQC (version 0.11.5)