FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13355138
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG33550.013.7317683
AGTGAGT36900.012.9334941
TAGCATG36300.012.6929088
GATCGGA150050.011.9394051
GTGAGTA40900.011.2647522
CTAGACC11200.010.927201120-124
AGAGCGT168000.010.7988888
CCTAGAC11800.010.493386115-119
GAGCGTC186100.09.7872789
AAGAGCG192700.09.7135827
TCGGAAG200650.09.2917953
CCTTTAG57050.08.9586324
GAGTAGA58500.08.8596324
ATCGGAA216000.08.7986332
ACCACTA71000.08.5174338
GAAGAGC240400.07.9659026
TTAGCAT68850.07.84232957
TAGAACC65400.07.5955487
TAGATCT52200.07.39192240-44
ACGTTAA32400.07.33175474
Produced by FastQC (version 0.11.5)