FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15440579
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA197300.07.9240361
GAGCGTC200800.07.6015029
AGAGCGT198350.07.33240468
TCGGAAG241500.06.7368033
AAGAGCG228700.06.64268357
AGGGGGG36601.8189894E-126.41745471
ATCGGAA285950.05.9918852
GAAGAGC266100.05.7361396
GGGGGGT31501.6921695E-75.48500822
GGAAGAG313950.05.1829455
TGGGGGG44702.2100721E-95.09035541
Produced by FastQC (version 0.11.5)