FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15637620
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG48650.018.200243
AGTGAGT49450.017.2749751
GTGAGTA54600.016.2210272
GAGTAGG64150.014.5879594
TAGGAGG64450.013.9617267
GTCTCTT76300.09.9411911
GGAGGGG103550.09.5240689
AGGAGGG102350.09.213738
GTAGGAG114150.08.6395786
AGTAGGA135300.07.50186445
CTAGGAG29150.06.717065350-54
AGCACAT127700.05.8626579
TTCTAGG43900.05.050512350-54
Produced by FastQC (version 0.11.5)