FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14647183
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTACAC38350.011.9323091
TTACACT43100.011.5310852
TACACTC41100.011.3909773
ACACTCA43800.011.0121144
CACTCAT64500.07.92444045
TAGTGCT43107.2759576E-125.67888077
ACTCATC103350.05.0847956
Produced by FastQC (version 0.11.5)