FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086843

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086843
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17741205
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA33500.010.9605168
CTAGCTC12750.06.88893935-39
ACACTAT56400.06.38258369
CCACACT76900.05.803837
CTAGATC15650.05.5198140-144
CACACGT128850.05.1623087140-144
Produced by FastQC (version 0.11.5)