FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16979688
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACTCG41200.07.06987241
TTTAGCC55500.05.7073329
TACTCGT67250.05.56732
ACTCGTT75050.05.1805443
Produced by FastQC (version 0.11.5)