FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14788372
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA106700.012.5488829
AGAGCAC125900.010.4636178
GATCGGA140350.09.9631781
AAGAGCA180800.07.8039447
ATCGGAA203300.07.37329152
TCGGAAG200300.07.33854063
GGAAGAG223650.06.5663225
CTAGATC4703.548395E-55.5143833140-144
GAAGAGC267950.05.48066046
CCCTCTA50150.05.39733430-34
CAGTCAC53950.05.284054825-29
Produced by FastQC (version 0.11.5)