FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005086938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61216831
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA152750.012.35820155-59
TCGCCGT172900.010.85087555-59
GCCGTAT181950.010.46256455-59
GTCGCCG193450.09.66072355-59
CGTATCA205400.09.41009460-64
TGGTCGC214900.08.98661650-54
GAGCGTC679250.08.74099
GTGGTCG230000.08.45966350-54
AGAGCGT740650.08.1141778
GATCGGA827400.07.2473361
AAGAGCG852050.07.13834147
ATCGGAA851800.07.10747962
TCGGAAG856700.07.02304273
TCTCGGT288450.06.976588745-49
CGGAAGA878650.06.8891064
CTCGGTG320600.06.33576145-49
CGGTGGT317500.06.14652650-54
CCGTATC204050.06.07566560-64
GGTCGCC219450.05.648797555-59
GCGTCGG63450.05.600462145
Produced by FastQC (version 0.11.5)