FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005086952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62719882
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC328900.08.221029
GATCGGA366100.07.29495951
AGAGCGT371000.07.2491838
CGCCGTA101100.06.968941755-59
ATCGGAA391950.06.9549172
TCGGAAG408900.06.8084113
CGGAAGA440900.06.2484914
TCGCCGT116600.06.104705355-59
AAGAGCG455700.06.0449637
GCCGTAT130400.05.758825355-59
GTCGCCG139250.05.15337555-59
Produced by FastQC (version 0.11.5)