FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005086983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82399454
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG408450.05.7153764145
GATCGGA381150.05.6111765145
ATCGGAA407700.05.2102046145
TCGGAAG419250.05.0320826145
TAGATCG162300.05.0029635145
Produced by FastQC (version 0.11.5)