FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16640430
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA198250.08.1747631
TCGGAAG213100.07.4631853
AGAGCGT218000.07.0636788
ATCGGAA226550.07.05252652
AAGAGCG258350.06.15541657
AGTGTAG50800.06.03652635-39
GGAAGAG317750.05.4803555
GAGCGTC305950.05.36238539
TAGATCT63650.05.157065440-44
CAGTGTA64800.05.08781935-39
Produced by FastQC (version 0.11.5)