FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53144076
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG130200.09.30964545-49
CTCGTAT151500.08.6324640-44
ATGCCGT159250.08.23961545-49
GATCGGA448450.07.9308321
TCGGAAG468200.07.8036173
ATCGGAA467300.07.78098772
CGGAAGA485050.07.4279114
TCTCGTA153500.07.386505640-44
CGTATGC145000.06.929517745-49
CGTCTTC199500.06.38097550-54
GCCGTCT167300.06.0664950-54
ATCTCGT181000.06.03995140-44
CCGTCTT202450.05.82964450-54
CGCGACA16750.0027178795.6264753145
AGAGCAC755500.05.10472978
AGATCGG456400.05.0670233145
Produced by FastQC (version 0.11.5)