FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087070

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087070
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66807175
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA150250.09.10993655-59
GAGCGTC617800.08.7302479
AGAGCGT666750.08.2197878
GCCGTAT177700.07.882255-59
TCGCCGT177100.07.761533755-59
GATCGGA744300.07.5269091
ATCGGAA752100.07.41721632
TCGGAAG770200.07.3322133
AAGAGCG767400.07.28338157
CGGAAGA794150.07.1018854
CGTATCA204050.06.857037560-64
GTCGCCG202900.06.76031455-59
TGGTCGC219200.06.574821550-54
GTGGTCG235250.06.157068750-54
GCGTCGG72250.05.524798145
CCGTATC202400.05.516022760-64
AGCGTCG534400.05.4594784145
AGATCGG759650.05.178182145
GTCGTGT504550.05.0632577145
GAAGAGC1206650.05.01651056
Produced by FastQC (version 0.11.5)