FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103382771
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC589050.08.9474979
AGAGCGT661650.07.96572738
GATCGGA680750.07.82804351
ATCGGAA720850.07.4563862
TCGGAAG742500.07.2643483
CGCCGTA179300.07.22121155-59
CGGAAGA782100.07.0263064
AAGAGCG790150.06.8996727
TCGCCGT201750.06.396101555-59
GCCGTAT228400.05.89102355-59
GTCGCCG238450.05.50896155-59
CGTATCA273350.05.086824460-64
TGGTCGC267000.05.07746550-54
Produced by FastQC (version 0.11.5)