FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52825397
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA389950.012.7009391
ATCGGAA410350.012.2735112
TCGGAAG413400.012.0654783
CGGAAGA427550.011.7679724
TATGCCG138950.011.16506845-49
CTCGTAT156450.010.52807140-44
ATGCCGT165800.09.7679845-49
TCTCGTA156150.09.64760740-44
CGTATGC159500.07.917600645-49
ATCTCGT188300.07.530687340-44
AGAGCAC713550.07.5179148
CGTCTTC208950.07.501035750-54
GCCGTCT176850.07.165463450-54
GAGCACA760900.07.06913579
CCGTCTT211100.06.90264850-54
GAAGAGC798700.06.7527286
TCGTATG174250.06.082480445-49
TGCCGTC172700.06.02795550-54
GTATGCC292050.05.39148945-49
AAGAGCA1079500.05.31854157
Produced by FastQC (version 0.11.5)