FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62074836
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA91050.09.10793955-59
TCGCCGT107350.07.81952855-59
GCCGTAT120250.07.30620155-59
AGCGTCG306200.07.10199459
GTCGCCG127200.06.59926455-59
TGGTCGC142550.06.183793550-54
GAGCGTC371600.06.0275598
CGTATCA146750.06.006718660-64
GTGGTCG159000.05.63520850-54
AGAGCGT410850.05.48701057
GATCGGA433800.05.265737145
Produced by FastQC (version 0.11.5)