Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005087199 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 50171348 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 9055 | 0.0 | 7.41443 | 45-49 |
CTCGTAT | 10625 | 0.0 | 7.055464 | 40-44 |
ATGCCGT | 12175 | 0.0 | 6.3480964 | 45-49 |
GATCGGA | 24845 | 0.0 | 6.200835 | 1 |
ATCGGAA | 25925 | 0.0 | 6.106889 | 2 |
TCTCGTA | 10480 | 0.0 | 5.907865 | 40-44 |
TCGGAAG | 27075 | 0.0 | 5.836755 | 3 |
CGGAAGA | 29355 | 0.0 | 5.457498 | 4 |