FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65217026
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA405250.022.6998231
ATCGGAA441050.021.070412
TCGGAAG449400.020.6143473
CGGAAGA468150.019.7576124
TATGCCG158800.014.97489345-49
CTCGTAT179800.013.0383840-44
CGTATGC181500.012.91825245-49
TCTCGTA184150.012.68314940-44
ATGCCGT198100.011.88699145-49
TATCTCG193250.011.83083840-44
AGAGCAC828150.011.5364868
GCCGTCT206050.011.413259550-54
GAGCACA882650.010.9144949
ATCTCGT220350.010.69820340-44
GAAGAGC919850.010.5676616
CGTCTTC243800.010.03258550-54
CCGTCTT245700.09.68945850-54
TCGTATG198750.09.60105845-49
TGCCGTC198750.09.54913450-54
AAGAGCA1264300.07.9924477
Produced by FastQC (version 0.11.5)