FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64522402
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC302900.011.4654179
GATCGGA321400.011.0736421
ATCGGAA344600.010.2891742
AGAGCGT341950.010.2409088
TCGGAAG370200.09.6743383
CGGAAGA399150.08.9915694
CGCCGTA99100.08.96867355-59
AAGAGCG411000.08.6791517
TCGCCGT115350.07.71777555-59
GCCGTAT133250.06.985687755-59
GTCGCCG135800.06.608946355-59
TGGTCGC156000.06.05990250-54
CGTATCA159400.05.97638260-64
GTGGTCG170700.05.605999550-54
Produced by FastQC (version 0.11.5)