FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14558427
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA14100.06.88975955-59
GAGCGTC55850.06.6197539
TCGCCGT17750.06.12648355-59
AGAGCGT65750.05.953788
CGTCGTG41401.0913936E-115.7783313145
CGTGTAG50600.05.730576145
GATCGGA65400.05.51377631
TCGGAAG76600.05.39444543
GCGTCGT40150.05.2721157140-144
ATCGGAA71850.05.1458732
GTCGCCG21700.05.07811155-59
TCGTGTA47304.947651E-105.0575666145
Produced by FastQC (version 0.11.5)