FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15833876
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT56450.015.9246491
GTGAGTA57600.015.87532
TAACCCC69200.012.6923199
ATAACCC100450.09.1737588
TAGCATG53850.08.1551398
GTATAAC142300.06.88054136
TGAGTAT145350.06.63795953
CTAGATC8300.06.4204044140-144
GAGTATA148300.06.4088134
TATAACC170800.06.0696447
GTCTCTT85500.05.5961581
TCCGATC58350.05.30606373
Produced by FastQC (version 0.11.5)