FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15833876
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTA53800.014.9896972
AGTGAGT56000.014.928921
TAACCCC66750.012.2930159
TAGCATG52200.08.9635628
ATAACCC97400.08.7208898
GTATAAC139800.06.4871996
GAGTATA145100.06.3507384
TGAGTAT141450.06.15768433
TATAACC165250.05.70670467
Produced by FastQC (version 0.11.5)