FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55630155
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA223050.07.77911141
TCCGATC38250.07.39145233
TATGCCG101350.07.26748945-49
ATCGGAA253950.07.1467592
TCGGAAG266400.06.8846673
CGGAAGA292450.06.37058454
CTCGTAT115950.06.27725940-44
TCTCGTA116850.06.11723740-44
CGTATGC117050.06.106887345-49
ATGCCGT131950.05.659033345-49
TATCTCG122800.05.44301740-44
GCCGTCT134350.05.37427850-54
Produced by FastQC (version 0.11.5)