FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087401

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087401
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81222680
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG145400.06.790889745-49
GATCGGA545050.06.34045031
ATCGGAA571900.06.2137932
TCGGAAG583100.05.95584733
CGGAAGA610100.05.79911044
CGTATGC174450.05.651736745-49
AGATCGG562850.05.591456145
CTCGTAT177300.05.569172440-44
TCTCGTA177400.05.36987340-44
TAGATCG212650.05.319699145
ATGCCGT193700.05.314625745-49
Produced by FastQC (version 0.11.5)