FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127799242
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG674250.05.311544145
CGCCGTA153300.05.287373555-59
CGTCGTG625650.05.2142982145
TCGTGTA663850.05.067139145
CGTGTAG686650.05.0255814145
GCGTCGT632850.05.0175085145
Produced by FastQC (version 0.11.5)