FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087433

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087433
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67316820
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG222050.013.20886345-49
CTCGTAT244850.011.66498540-44
TCTCGTA240800.011.44573740-44
CGTATGC250350.011.426146545-49
ATGCCGT258050.011.20318845-49
GCCGTCT266550.010.63488850-54
GATCGGA784500.010.1715031
CGTCTTC303600.09.88151550-54
ATCTCGT279600.09.77963440-44
ATCGGAA827600.09.7636372
TCGGAAG824200.09.7276143
CGGAAGA838050.09.5495874
CCGTCTT310900.09.49092450-54
GTATGCC405200.07.67499745-49
AGAGCAC1142100.07.3244698
GAGCACA1193700.07.0746549
AATCTCG413750.07.06432440-44
GAAGAGC1268150.06.68224246
TGCCGTC264050.06.501751450-54
TCGTATG267500.06.46601945-49
Produced by FastQC (version 0.11.5)