FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087487

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087487
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65690885
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA439750.013.1677691
ATCGGAA467100.012.6047732
TCGGAAG481350.012.2908893
CGGAAGA507350.011.5750494
TATGCCG150400.011.36585945-49
CGTATGC169400.09.85996445-49
CTCGTAT172900.09.76944740-44
TCTCGTA163750.09.39448840-44
ATGCCGT186350.09.14207545-49
GCCGTCT197600.08.37210950-54
ATCTCGT200350.07.70724840-44
AGAGCAC849350.07.45149958
CGTCTTC233600.07.41705150-54
CCGTCTT239800.07.10435850-54
GAGCACA922350.06.8617459
GAAGAGC943550.06.7075736
TGCCGTC190950.06.393351650-54
TCGTATG193300.06.34563145-49
AATCTCG298200.05.679031440-44
GTATGCC332600.05.55371445-49
Produced by FastQC (version 0.11.5)