FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141593030
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA221250.05.668634455-59
GCGTCGG122750.05.0798087145
TCGCCGT254450.05.077160455-59
CGTCGTG738700.05.0646796145
Produced by FastQC (version 0.11.5)