FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60921188
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC408850.06.84393749
AGAGCGT456400.06.22620068
CGCCGTA112450.05.930922555-59
GATCGGA492100.05.8785631
ATCGGAA509650.05.7755692
TCGGAAG524650.05.4994593
AAGAGCG546050.05.31019267
TCGCCGT126150.05.309805455-59
CGGAAGA551450.05.25815444
GCCGTAT138850.05.106070555-59
AGATCGG518300.05.0212517145
Produced by FastQC (version 0.11.5)