FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72137949
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA162700.012.49371455-59
GAGCGTC480200.012.2747339
TCGCCGT180350.011.25493455-59
AGAGCGT529900.011.2055628
GATCGGA538550.011.0183561
GCCGTAT194300.010.56626555-59
ATCGGAA579800.010.2924032
AGCGTCG411550.010.27045259
TCGGAAG601100.09.9858873
GTCGCCG206900.09.85271455-59
AAGAGCG622600.09.595377
CGGAAGA628700.09.5825164
CGTATCA227700.09.06143660-64
TGGTCGC230500.08.98229850-54
GTGGTCG247900.08.52729350-54
TCTCGGT317200.06.87913645-49
CTCGGTG349600.06.299657345-49
CGGTGGT346400.06.16531250-54
GAAGAGC1125950.05.8016496
CCGTATC216550.05.671270460-64
Produced by FastQC (version 0.11.5)