FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51986019
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC370200.015.2734399
AGAGCGT409750.013.8699778
GATCGGA450400.012.9438471
ATCGGAA461800.012.7003552
TCGGAAG470750.012.3499743
AAGAGCG479750.012.0578287
CGGAAGA489700.011.88686854
CGCCGTA118950.011.61627655-59
TCGCCGT131100.010.50653355-59
GCCGTAT143250.09.75710255-59
GTCGCCG145250.09.34325455-59
TGGTCGC163600.08.69413750-54
CGTATCA167100.08.3295360-64
GTGGTCG177700.08.1266750-54
GAAGAGC842150.07.42852356
GACGGTT189400.07.30296730-34
CCGTATC161450.07.040503560-64
GGTCGCC171400.06.72503855-59
TCTCGGT226750.06.522183445-49
TGACGGT215150.06.50978630-34
Produced by FastQC (version 0.11.5)