FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63089897
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC56800.06.94180971
GCGACCA66300.06.12349943
CGACCAC80400.05.22999434
AGATCGG1005850.05.1673975145
TAGATCG314700.05.1137815145
ACACGTC657950.05.1012197145
TCGGAAG965100.05.01002145
Produced by FastQC (version 0.11.5)