Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005087600 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 72974195 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GAGCGTC | 36645 | 0.0 | 7.260156 | 9 |
CGCCGTA | 10200 | 0.0 | 6.9926972 | 55-59 |
AGAGCGT | 40875 | 0.0 | 6.5974345 | 8 |
GATCGGA | 42470 | 0.0 | 6.2521343 | 1 |
ATCGGAA | 45230 | 0.0 | 6.202101 | 2 |
TCGCCGT | 12115 | 0.0 | 6.0907974 | 55-59 |
TCGGAAG | 46505 | 0.0 | 5.876964 | 3 |
CGGAAGA | 49720 | 0.0 | 5.67192 | 4 |
AAGAGCG | 49025 | 0.0 | 5.6189594 | 7 |
GCCGTAT | 14025 | 0.0 | 5.4060326 | 55-59 |
TAGATCG | 17585 | 0.0 | 5.235334 | 145 |
GTCGCCG | 14350 | 0.0 | 5.0310345 | 55-59 |