FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93559753
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA478800.06.39360051
TATGCCG146250.06.205786745-49
ATCGGAA511950.06.06502872
TCGGAAG526500.05.7826253
AGATCGG505250.05.6976037145
CGGAAGA559200.05.44480474
CTCGTAT170050.05.379925340-44
CGTATGC172200.05.354788345-49
TCTCGTA170100.05.26753840-44
Produced by FastQC (version 0.11.5)