FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17028143
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA148150.016.0310461
ATCGGAA209300.011.8328772
TCGGAAG248050.09.7789233
AGAGCGT254550.09.1628588
GAGCGTC285200.08.405319
AAGAGCG311550.07.9947967
GAAGAGC343500.07.3980496
TTACTCG66600.07.047253625-29
TAGATCT71050.06.46461240-44
GGAAGAG408900.06.17958355
ATTACTC86750.05.709071625-29
CGGAAGA455700.05.56074334
Produced by FastQC (version 0.11.5)