FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66438108
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA1068650.05.545817145
ATCGGAA1062500.05.4481983145
TATGCCG186500.05.434268545-49
AGATCGG1107300.05.1426067145
CACGTCT815900.05.1122236145
ACACGTC748800.05.1053286145
Produced by FastQC (version 0.11.5)