FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005087796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131017455
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA162850.07.532514655-59
GAGCGTC607600.07.3248279
AGAGCGT684450.06.60828078
GATCGGA704350.06.32518531
TCGCCGT194500.06.26951255-59
GCGTCGG96550.06.15764145
ATCGGAA752250.06.0178952
TCGGAAG788400.05.7194713
GCCGTAT225850.05.59826955-59
GTCGCCG230500.05.52936555-59
AAGAGCG831450.05.4312227
CGGAAGA844500.05.33014774
Produced by FastQC (version 0.11.5)