FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087939

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087939
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13534776
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA154450.010.2542029
AGAGCAC154500.010.1115848
GATCGGA241600.06.89572331
GAAGAGC247450.06.7205446
AAGAGCA250750.06.60343657
TCGGAAG280750.05.8501393
ATCGGAA319000.05.44223742
GGAAGAG354150.05.00059135
Produced by FastQC (version 0.11.5)