FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005087940

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005087940
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13534776
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC142200.010.9854249
AGAGCGT168900.09.4619378
AAGAGCG204100.07.900637
GATCGGA236650.06.9629821
GAAGAGC240900.06.7838766
TCGGAAG274200.05.9595063
ATCGGAA315100.05.6217742
TAGATCT64050.05.349328540-44
GGAAGAG353850.05.0859015
ATTAGGC64000.05.084270525-29
Produced by FastQC (version 0.11.5)